About: root means square deviation (RMSD) with fengycin in red, surfactin in green, iturin in blue

1JFF

Molecular Docking and Dynamics Simulation of Protein β-Tubulin and Antifungal Cyclic Lipopeptides 1

Information

Details.

Scientist
Nubia Noemi Cob-Calan,1 Luz America Chi-Uluac,2 Filiberto Ortiz-Chi,3 Daniel Cerqueda-García,4 Gabriel Navarrete-Vázquez,5 Esaú Ruiz-Sánchez,1,* and Emanuel Hernández-Núñez4,*
Protein
Tubulin ,
Ligand
PubChem (Compound CID: 102287549, 100977820, 10129764)
Simulation Duration
not available
InChIKey
102287549: RDUGMXONDQDIRN-QZBZMMCASA-N 100977820: CUOJDWBMJMRDHN-LUZUGCRASA-N 10129764: NJGWOFRZMQRKHT-VKBYPPDESA-N
SMILES
102287549: CC(C)CCCCCCCCC1CC(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N2CCC[C@H]2C(=O)N[C@@H](C(=O)N[C@H](C(=O)N1)CO)CC(=O)N)CCC(=O)N)CC(=O)N)CC3=CC=C(C=C3)O)CC(=O)N 100977820:CCCCCCCCCCCCCC(CC(=O)N[C@@H](CCC(=O)O)C(=O)N[C@H](CCCN)C(=O)N[C@H]1CC2=CC=C(C=C2)OC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@@H]3CCCN3C(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@H](NC1=O)[C@@H](C)O)CCC(=O)O)C)CCC(=O)N)CC4=CC=C(C=C4)O)[C@@H](C)CC)O 10129764:CC(C)CCCCCCCCCC1CC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)O1)CC(C)C)CC(C)C)CC(=O)O)C(C)C)CC(C)C)CC(C)C)CCC(=O)O
Molecular Formula
102287549: C48H74N12O14 100977820:C72H110N12O20 10129764: C53H93N7O13
Protein Details
Highly conserved α- and β-tubulin heterodimers assemble into dynamic microtubules and perform multiple important cellular functions such as structural support, pathway for transport and force generation in cell division.
Ligand Details
Cyclic lipopeptides
Attachments